Stultz, Collin: search on Z-Library

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1

Protein classification by stochastic modeling and optimal filtering of amino-acid sequences

James V. White, Collin M. Stultz, Temple F. Smith

Journal:

Mathematical Biosciences

Year:

1994

Language:

english

File:

PDF, 2.43 MB

english, 1994

2

Spectral Energy of ECG Morphologic Differences to Predict Death

Zeeshan Syed, Phil Sung, Benjamin M. Scirica, David A. Morrow, Collin M. Stultz, John V. Guttag

Journal:

Cardiovascular Engineering

Year:

2009

Language:

english

File:

PDF, 375 KB

english, 2009

3

Identifying unreliable predictions in clinical risk models

Myers, Paul D., Ng, Kenney, Severson, Kristen, Kartoun, Uri, Dai, Wangzhi, Huang, Wei, Anderson, Frederick A., Stultz, Collin M.

Journal:

npj Digital Medicine

Year:

2020

Language:

english

File:

PDF, 1.38 MB

english, 2020

4

Structural analysis based on state-space modeling

Collin M. Stultz, James V. White, Temple F. Smith

Journal:

Protein Science

Year:

1993

Language:

english

File:

PDF, 2.15 MB

english, 1993

5

Deep Learning for Cardiovascular Risk Stratification

Schlesinger, Daphne E., Stultz, Collin M.

Journal:

Current Treatment Options in Cardiovascular Medicine

Year:

2020

File:

PDF, 1.36 MB

2020

6

Intrinsically Disordered Proteins: Where Computation Meets Experiment

Burger, Virginia, Gurry, Thomas, Stultz, Collin

Journal:

Year:

2014

Language:

english

File:

PDF, 4.29 MB

english, 2014

7

[Advances in Molecular and Cell Biology] Volume 22 || Predicting Protein Structure With Probabilistic Models

Stultz, Collin M.

Year:

1997

Language:

english

File:

PDF, 2.80 MB

english, 1997

8

Characterizing Order and Disorder of Protein Structural Ensembles

Fisher, Charles K., Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2011

Language:

english

File:

PDF, 37 KB

english, 2011

9

Structural Basis of Low-Affinity Nickel Binding to the Nickel-Responsive Transcription Factor NikR from Escherichia coli

Phillips, Christine M., Schreiter, Eric R., Stultz, Collin M., Drennan, Catherine L.

Journal:

Year:

2010

Language:

english

File:

PDF, 3.55 MB

english, 2010

10

Perturbing the folding energy landscape of the bacterial immunity protein Im7 by site-specific N-linked glycosylation

Mark M. Chen, Alice I. Bartlett, Paul S. Nerenberg, Claire T. Friel, Christian P. R. Hackenberger, Collin M. Stultz, Sheena E. Radford and Barbara Imperiali

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.38 MB

english, 2010

11

The Advent of Clinically Useful Deep Learning

Stultz, Collin M.

Journal:

JACC: Clinical Electrophysiology

Year:

2019

Language:

english

File:

PDF, 101 KB

english, 2019

12

[IEEE 2019 IEEE International Conference on Data Mining (ICDM) - Beijing, China (2019.11.8-2019.11.11)] 2019 IEEE International Conference on Data Mining (ICDM) - Generative Oversampling with a Contrastive Variational Autoencoder

Dai, Wangzhi, Ng, Kenney, Severson, Kristen, Huang, Wei, Anderson, Fred, Stultz, Collin

Year:

2019

File:

PDF, 9.46 MB

2019

13

Residual structure within the disordered C-terminal segment of p21Waf1/Cip1/Sdi1 and its implications for molecular recognition

Mi-Kyung Yoon, Veena Venkatachalam, Austin Huang, Byong-Seok Choi, Collin M. Stultz, James J. Chou

Journal:

Protein Science

Year:

2009

Language:

english

File:

PDF, 381 KB

english, 2009

14

Do collagenases unwind triple-helical collagen before peptide bond hydrolysis? Reinterpreting experimental observations with mathematical models

Paul S. Nerenberg, Ramon Salsas-Escat, Collin M. Stultz

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 314 KB

english, 2008

15

Metal Preference At The Second Metal Binding Site Of E. coli NikR

Phillips, Christine M., Nerenberg, Paul S., Drennan, Catherine L., Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 40 KB

english, 2009

16

Modeling Intrinsically Disordered Proteins with Bayesian Statistics

Fisher, Charles K., Huang, Austin, Stultz, Collin M.

Journal:

Journal of the American Chemical Society

Year:

2010

Language:

english

File:

PDF, 1.40 MB

english, 2010

17

Toward a consensus in protein structure nomenclature

DaSilva, Linder C, Gurry, Thomas, Stultz, Collin M

Journal:

Intrinsically Disordered Proteins

Year:

2014

Language:

english

File:

PDF, 353 KB

english, 2014

18

Dynamic ligand design and combinatorial optimization: Designing inhibitors to endothiapepsin

Collin M. Stultz, Martin Karplus

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2000

Language:

english

File:

PDF, 1.15 MB

english, 2000

19

Cleavage Site Specificity and Conformational Selection in Type I Collagen Degradation

Salsas-Escat, Ramon, Nerenberg, Paul S., Stultz, Collin M.

Journal:

Year:

2010

Language:

english

File:

PDF, 2.39 MB

english, 2010

20

A Structure-free Method for Quantifying Conformational Flexibility in proteins

Burger, Virginia M., Arenas, Daniel J., Stultz, Collin M.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

21

Localized Unfolding of Collagen Explains Collagenase Cleavage Near Imino-poor Sites

Collin M Stultz

Journal:

Journal of Molecular Biology

Year:

2002

Language:

english

File:

PDF, 1.36 MB

english, 2002

22

Beatquency domain and machine learning improve prediction of cardiovascular death after acute coronary syndrome

Liu, Yun, Scirica, Benjamin M., Stultz, Collin M., Guttag, John V.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 754 KB

english, 2016

23

The Assembly of Individual Chaplin Peptides from Streptomyces coelicolor into Functional Amyloid Fibrils

Sawyer, Elizabeth B., Claessen, Dennis, Haas, Maria, Hurgobin, Bhavna, Gras, Sally L., Stultz, Collin M.

Journal:

Year:

2011

Language:

english

File:

PDF, 2.51 MB

english, 2011

24

RISK STRATIFICATION POST-ACS USING A VARIABLE NUMBER OF PATIENT FEATURES

Stultz, Collin, Myers, Paul, Huang, Wei (Tiffany), Anderson, Fred

Journal:

Journal of the American College of Cardiology

Year:

2019

Language:

english

File:

PDF, 273 KB

english, 2019

25

The Contribution of Interchain Salt Bridges to Triple-Helical Stability in Collagen

Gurry, Thomas, Nerenberg, Paul S., Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 996 KB

english, 2010

26

The Mechanism of Amyloid-β42 Fibril Elongation

Gurry, Thomas, Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 41 KB

english, 2014

27

Improving Protein Expression Prediction Using Extra Features and Ensemble Averaging

Fernandes, Armando, Vinga, Susana, Stultz, Collin M.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.00 MB

english, 2016

28

MCSS functionality maps for a flexible protein

Collin M. Stultz, Martin Karplus

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1999

Language:

english

File:

PDF, 480 KB

english, 1999

29

Conformational selection and collagenolysis in Type III collagen

Ramon Salsas-Escat, Collin M. Stultz

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2010

Language:

english

File:

PDF, 343 KB

english, 2010

30

On the potential surface of the locally enhanced sampling approximation

Stultz, Collin M., Karplus, Martin

Journal:

The Journal of Chemical Physics

Year:

1998

Language:

english

File:

PDF, 381 KB

english, 1998

31

Differential Unfolding of α1 and α2 Chains in Type I Collagen and Collagenolysis

Paul S. Nerenberg, Collin M. Stultz

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.14 MB

english, 2008

32

The Advent of Clinically Useful Deep Learning

Stultz, Collin M.

Journal:

JACC: Clinical Electrophysiology

Year:

2019

File:

PDF, 101 KB

2019

33

Insight into the Degradation of Type-I Collagen Fibrils by MMP-8

Lu, Kuojung G., Stultz, Collin M.

Journal:

Journal of Molecular Biology

Year:

2013

Language:

english

File:

PDF, 1.45 MB

english, 2013

34

Finding the Missing Link - Modeling the Conformational Space of the Active and Inactive forms of E. Coli Ribonucleotide Reductase

Ullman, Orly, Zimanyi, Christina M., Drennan, Catherine L., Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 45 KB

english, 2014

35

Mollack: a web server for the automated creation of conformational ensembles for intrinsically disordered proteins

Ziegler, Zachary, Schmidt, Molly, Gurry, Thomas, Burger, Virginia, Stultz, Collin M.

Journal:

Year:

2016

Language:

english

File:

PDF, 216 KB

english, 2016

36

Choosing Clinical Variables for Risk Stratification Post-Acute Coronary Syndrome

Myers, Paul D., Huang, Wei, Anderson, Fred, Stultz, Collin M.

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 1.19 MB

english, 2019

37

Strong underwater adhesives made by self-assembling multi-protein nanofibres

Zhong, Chao, Gurry, Thomas, Cheng, Allen A., Downey, Jordan, Deng, Zhengtao, Stultz, Collin M., Lu, Timothy K.

Journal:

Nature Nanotechnology

Year:

2014

Language:

english

File:

PDF, 5.99 MB

english, 2014

38

An Assessment of Potential of Mean Force Calculations with Implicit Solvent Models

Stultz, Collin M.

Journal:

Journal of Physical Chemistry B

Year:

2004

Language:

english

File:

PDF, 264 KB

english, 2004

39

Active Unfolding of Collagen is not Required for Collagenolysis to Occur in Solution

Salsas-Escat, Ramon, Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 36 KB

english, 2009

40

Conformational Sampling with Implicit Solvent Models: Application to the PHF6 Peptide in Tau Protein

Huang, Austin, Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2007

Language:

english

File:

PDF, 911 KB

english, 2007

41

Cosmology and proteins: landscape of possibilities

Stultz, Collin M.

Journal:

Year:

2006

Language:

english

File:

PDF, 83 KB

english, 2006

42

ASSOCIATION OF ELECTROCARDIOGRAPHIC MARKERS WITH HEART FAILURE FOLLOWING NON-ST-ELEVATION ACUTE CORONARY SYNDROME: RESULTS FROM THE MERLIN-TIMI 36 TRIAL

Zeeshan Syed, Moiz Ali, Benjamin Scirica, David Morrow, Collin Stultz, John Guttag

Journal:

Journal of the American College of Cardiology

Year:

2012

Language:

english

File:

PDF, 378 KB

english, 2012

43

Identification of a Negative Allosteric Site on Human α4β2 and α3β4 Neuronal Nicotinic Acetylcholine Receptors

Pavlovicz, Ryan E., Henderson, Brandon J., Bonnell, Andrew B., Boyd, R. Thomas, McKay, Dennis B., Li, Chenglong, Stultz, Collin M.

Journal:

Year:

2011

Language:

english

File:

PDF, 894 KB

english, 2011

44

Explaining the Structural Plasticity of α-Synuclein

Ullman, Orly, Fisher, Charles K., Stultz, Collin M.

Journal:

Journal of the American Chemical Society

Year:

2011

Language:

english

File:

PDF, 4.41 MB

english, 2011

45

Finding order within disorder: elucidating the structure of proteins associated with neurodegenerative disease

Huang, Austin, Stultz, Collin M

Journal:

Future Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 1.31 MB

english, 2009

46

Non-Enzymatic Decomposition of Collagen Fibers by a Biglycan Antibody and a Plausible Mechanism for Rheumatoid Arthritis

Antipova, Olga, Orgel, Joseph P. R. O., Stultz, Collin M.

Journal:

Year:

2012

Language:

english

File:

PDF, 2.80 MB

english, 2012

47

Elucidating the Mechanism of Collagenolysis in the Native Collagen Fibril

Lu, Kuojung G., Stultz, Collin M.

Journal:

Biophysical Journal

Year:

2012

Language:

english

File:

PDF, 87 KB

english, 2012

48

Machine Learning Improves Risk Stratification After Acute Coronary Syndrome

Myers, Paul D., Scirica, Benjamin M., Stultz, Collin M.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.98 MB

english, 2017

49

Solution structure and biochemical characterization of a spare part protein that restores activity to an oxygen-damaged glycyl radical enzyme

Bowman, Sarah E. J., Backman, Lindsey R. F., Bjork, Rebekah E., Andorfer, Mary C., Yori, Santiago, Caruso, Alessio, Stultz, Collin M., Drennan, Catherine L.

Journal:

JBIC Journal of Biological Inorganic Chemistry

Year:

2019

Language:

english

File:

PDF, 2.92 MB

english, 2019

50

Physical Basis of Metal-Binding Specificity in Escherichia coli NikR

Phillips, Christine M., Nerenberg, Paul S., Drennan, Catherine L., Stultz, Collin M.

Journal:

Journal of the American Chemical Society

Year:

2009

Language:

english

File:

PDF, 3.98 MB

english, 2009

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